Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVVSLFSGIGGIELGLHQSGHTTEIFCEVDPLAKAVLSKNFPGVKIEDDINEIR--ELPSCDLVAAGFPCQDLSQAGGKEGIDGSRSGLVKKLFELIEKKEHANRPPWILIENVPYMLRLNRGKAMSYLTSVLSELGYTWAYRTVDARCFGLPQRRHRVILLASLFE-DPKDVIFSQDHSEP-DLDGKPSVVDHS----NYY------GFYWT----------------EGLRGVGWAREAVPPIKCGSSVGIASPPAVWSPYEDIVGTINIRDAERLQGFPEDWTNITTETGKDIKEGARWRLVGNAVSVRVSKWIGENLSQPKGSISDFEGELVTKTWPSAAWGYGDKKYKVPVSKWVANTEQIAISEFLNHPLKPLSARALNGFLGRAARCTNVNYSDEFINSLERCKDRQLQKV
5CIY Chain:A ((12-324))LRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK-PEGDITQVNEKTIPDHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREK----KPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGI-AITLSAYGGGIFAKTG--GYLVNGKTRKLHPRECARVMGYPDSYK-------VHPSTSQAYKQFGNSVVINVLQYIAYNIGSSLNF-------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5CIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1607 -143557 -89.33 -507.27
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -89.33
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_5CIY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CIY-query.scw
PDB file : Tito_Scwrl_5CIY.pdb: