Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKPKKKKFEVTEQQTIDAVLQQMKEEGYLPVRRMEEPIFMEKKENGSIQIVPCGKKIVFEGKLI
4CYD Chain:A ((190-209))--------------ETVNKALATFAHRGWIRLEG-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4CYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 12 -4228 -352.33 -211.40
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -352.33
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.876

(partial model without unconserved sides chains):
PDB file : Tito_4CYD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CYD-query.scw
PDB file : Tito_Scwrl_4CYD.pdb: