Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIQLSEDQIVKVTGDVSSPKGFQAKGVHCGLRYS-KKDLGVIISETPAVSAAVYTQSHFQAAPIKVTQDSLKHGPTLKAVIVNSAIANACTGEQGLKDAYTMRESFASQLGIEPELVAVSSTGVIGEHLDMEKIHAGIELLKETPAGSGDFEEA---ILTTDTVIKQTCYELAIGGKTVTIGGAAKGSGMIHPNMATMLGFVTTDAAIEEKALQKALREITDVSFNQITVDGETSTNDMVLVMANGCAENECLTEDHPDWPVFKKALLLTCEDLAKEIARDGEGATKLIEAQVQGAKNNLDANVIAKKIVGSNLVKTAVYGTDANWGRIIGAIGHSA--AQVTAEEVEVYLGGQCLF--KNNEPQPFSESIAKEYLEGDEITIVIKMAEGDGNGRAWGCDLTYDYIKINASYRT
1VZ7 Chain:D ((8-390))-----------------TPRGFVVHTAPVGLADDGRDDFTVLAS--PATVSAVFTRSRFAGPSVVLCREAVADGQA-RGVVVLARNANVATGLEGEENAREVREAVARALGLPEGEMLIASTGVIGRQYPMESIREHLKTL-EWPAGEGGFDRAARAIMTTDTRPKEV--RVSVGGATLV--GIAKGVGMLEPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLA-------GEVDAGEFEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPP-----DDALRAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSE---


General information:
TITO was launched using:
RESULT:

Template: 1VZ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 2277 -192262 -84.44 -525.31
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain D : 0.80

3D Compatibility (PKB) : -84.44
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.390

(partial model without unconserved sides chains):
PDB file : Tito_1VZ7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VZ7-query.scw
PDB file : Tito_Scwrl_1VZ7.pdb: