Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLTKRLLTIYIMLLGLIAWFPGAAQAEEKQPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTEE
1ST9 Chain:B ((9-132))------------------------------------FVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNV---GESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDY---


General information:
TITO was launched using:
RESULT:

Template: 1ST9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 551 -79508 -144.30 -646.40
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -144.30
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.682

(partial model without unconserved sides chains):
PDB file : Tito_1ST9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ST9-query.scw
PDB file : Tito_Scwrl_1ST9.pdb: