Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTSKSEKVMVQLDEVDQNDLVAIYENE
1A4X Chain:B ((4-180))---KAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLY----------DEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTSKSEKVMVQLDEVDQNDLVAIYEN-


General information:
TITO was launched using:
RESULT:

Template: 1A4X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 924 -123659 -133.83 -740.47
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain B : 0.98

3D Compatibility (PKB) : -133.83
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.98
QMean score : 0.638

(partial model without unconserved sides chains):
PDB file : Tito_1A4X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1A4X-query.scw
PDB file : Tito_Scwrl_1A4X.pdb: