Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKERGLLIVLSGPSGVGKGTVRQAIFSQEDTKFEYSISVTTRSPREGEVNGVDYFFKTRDEFEQMIADNKLLEWAEYVGNYYGTPVDYVEQTLQDGKDVFLEIEVQGALQVRNAFPEGLFIFLAPPSLSELKNRIVTRGTETDALIENRMKAAKAEIEMMDAYDYVVENDNVETACDKIKAIVLAEHLKRERVAPRYKKMLEVE
4QRH Chain:D ((7-203))--EKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHL--------------IQSRINEARKEVEMMNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERVEAKYRK-----


General information:
TITO was launched using:
RESULT:

Template: 4QRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 766 -80804 -105.49 -441.55
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain D : 0.89

3D Compatibility (PKB) : -105.49
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_4QRH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QRH-query.scw
PDB file : Tito_Scwrl_4QRH.pdb: