Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQMNRYDQAATLRAKMEKRERVLPMVYSQKAKTLAVISGKGGVGKSNITLNMALALQDKGKKVLLIDLDIGMGNIDILIGNSSSATIIDVLTDRKPLLQSLSVGPKGLRYISGGTGLDVMFQLDQRKWTFFANELSHALSQFDYVLFDMGAGLSKDQLPFILSAEDILIITTPEPTAIMDAYSAVKHLVLTENKLSMKVAVNRCRDQKEGLDAFARLSRTIHMFLDVQVQFAGSVSDDVIVSKAVVEQVPFFIKSPQAKASRSVRILA-DALFEREETRHKEDKQTFIEKLSSFLMRRA
4RZ3 Chain:B ((29-272))----------------------SP-------RTIAVTSGKGGVGKSNVSLNFSLSLSKLGFRVLLLDMAIGMGNIDILLGESSSLALADWFSARLPLSELVKSGPEHLSYIAGGTGAAQWQGLDTASIDRFLTELQAVASQYDYLIFDMGAGASGERLYFLKSVDDVFVVTTPEPTAMTDAYAMMKYMHAAGSEAPFSVIVNRAGKEREGYEVFERLKHVTGRFLNKDIALLGIIPEDRTVARAVVSQTPFVLLDPAAKASKAVRQMAFRYAP--------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1368 -170401 -124.56 -701.24
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -124.56
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_4RZ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RZ3-query.scw
PDB file : Tito_Scwrl_4RZ3.pdb: