Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVQII-FDSKTGNVQRFVNKTGFQQIR-KVDEMDH--VDTPFVLVTYTTN----FGQVPASTQSFL--EKYAHLLLGVAASGNKVWGDNFAKSADTISRQYQVPILHKFELSGTSKDVELFTQEVERVVTKSSAKMDPVK
3N3B Chain:D ((23-139))--QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIE---------------------


General information:
TITO was launched using:
RESULT:

Template: 3N3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 464 -59832 -128.95 -559.18
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain D : 0.73

3D Compatibility (PKB) : -128.95
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.406

(partial model without unconserved sides chains):
PDB file : Tito_3N3B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N3B-query.scw
PDB file : Tito_Scwrl_3N3B.pdb: