Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MDMNEHRNRRLKLIMISATFGGLLFGYDTGVINGALPFM----ARPDQLDLTPVTE--GLVTSILLLGAAFGALLCGRLADRYGRRKMILNLSFLFFLASLGTA----------------LAPNVFIMAVFRFLLGLAVGGASAMVPAFLAEMAPHEKRGRMVTQNELMIVGGQFLAYVFNAILG----VTMANTGHVWRYMLVICAVPAIMLFASMLKVPESPRWLISKGKNSEALRVLKQIREDKRAEAECREIQEAVEKDTALEKASLKDFSTPWLRRLLWIGIGV-------AIVNQITGVNSIMYYGTQILKESGFGTKAALIANIGNGLISVIAVIFGIWLVGKVRRRPILLIGLAGTTTALLLIAIFSIVLDGSMALPYVVLSLTVLF-LAFMQGCVGPVTWLVIAEIFPQRLRGLGSGISVFFLWILNFVIGFAFPILLSSVGL-SFTFFIFVALGVLAIGFVYKFMPETKGRTLEELEEHFRSRHDHNTPEQSVIEV 4JA4 Chain:B ((9-475)) ---------YIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDG-WRYMFASECIPALLFLMLLYTVPESPRWLM----QEQAEGILRKIMGNTLATQAVQEIKHSLDHG--------------------MFGVGVIVIGVMLSIFQQFVGINVVLYYAPEV------------LQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALG-----MAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSW-NGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELE-------------------

General information: TITO was launched using: RESULT: Template: 4JA4.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1865 -231396 -124.07 -578.49 target 2D structure prediction score : 0.62 Monomeric hydrophicity matching model chain B : 0.77 3D Compatibility (PKB) : -124.07 2D Compatibility (Sec. Struct. Predict.) : 0.62 1D Compatibility (Hydrophobicity) : 0.77 QMean score : 0.354

(partial model without unconserved sides chains): PDB file : Tito_4JA4.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4JA4-query.scw PDB file : Tito_Scwrl_4JA4.pdb: