Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRVLVVDDAKFMRVKIREILEEANYIIAGEAADGEQAADLYKKLRPDLVTMDITMPVKNGIKALRDILTFDPKAKVIMCTAMRQQRIVTEAIELGAKDFIVKPFEETKVLEAVSRVMGH
4TMY Chain:B ((4-118))--RVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKV---


General information:
TITO was launched using:
RESULT:

Template: 4TMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 604 -77775 -128.77 -676.30
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain B : 0.89

3D Compatibility (PKB) : -128.77
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.618

(partial model without unconserved sides chains):
PDB file : Tito_4TMY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TMY-query.scw
PDB file : Tito_Scwrl_4TMY.pdb: