Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAIIKEDVQASLERYADRPVYIHLETTTGSYSAHLNEKNMTVVAYIRNAKVTYHQAKIKGNGPYRVGLKTEEGWIYAEGLTEYTVDEENRLLMAGHLPGGKLAISLQISEKPFTV
1NJH Chain:A ((4-119))MKAIIKEDVQASLERYADRPVYIHLETTTG----------MTVVAYIRNAKVTYHQAKIKGNGPYRVGLKTEEGWIYAEGLTEYTVDEENRLLMAGHLPGGKLAISLQISEKPFTV


General information:
TITO was launched using:
RESULT:

Template: 1NJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 487 -66325 -136.19 -625.71
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.97

3D Compatibility (PKB) : -136.19
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.97
QMean score : 0.616

(partial model without unconserved sides chains):
PDB file : Tito_1NJH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NJH-query.scw
PDB file : Tito_Scwrl_1NJH.pdb: