Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYNKEEKIKSLNRMQYEVTQNNGTEPPFQNEYWDHKEEGLYVDIVSGKPLFTSKDKFDSQCGWPSFTKPIEEE-VEEKLDTSHGMIRTEVRSRTADSHLGHVFNDGPGP-NGLRYCINSAALRFVPKHKLKEEGYESYLHLFNK
3E0M Chain:C ((179-313))----------SLSEESYRVTQEAATEAPFTNAYDQTFEEGIYVDITTGEPLFFAKDKFASGCGWPSFSRPLSKELIHYYKDLSHGMERIEVRSRSGSAHLGHVFTDGPRELGGLRYCINSASLRFVAKDEMEKAGYGYLLPYLNK


General information:
TITO was launched using:
RESULT:

Template: 3E0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 679 11805 17.39 88.76
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain C : 0.84

3D Compatibility (PKB) : 17.39
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_3E0M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E0M-query.scw
PDB file : Tito_Scwrl_3E0M.pdb: