Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKRRLFIRTGILLVLICALGYTIYNAVFAGKESISEGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGETSG
1ST9 Chain:B ((4-138))---------------------------------------SDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKP-----


General information:
TITO was launched using:
RESULT:

Template: 1ST9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 662 -100824 -152.30 -746.84
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain B : 0.86

3D Compatibility (PKB) : -152.30
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.726

(partial model without unconserved sides chains):
PDB file : Tito_1ST9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ST9-query.scw
PDB file : Tito_Scwrl_1ST9.pdb: