Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIFKKAVFVIMISFLIATVNVNTAHAAIDVSAKSAIIIDGASGRVLYAKDEHQKRRIASITKIMTAVLA---IESGKMDQT--VTVSANAVRTEGSAIYLTEGQKVKLKDLVYGLMLRSGNDAAVAIAEHVGGSLDGFVYMMNQKAEQLGMKNTRFQNPHGLDDHENHYSTAYDMAILTKYAMKLKDYQKISGTKIYKAETMESVWKN---KNKLLTMLYPYSTGG-KTGYTKLAKRTLVSTASKDGIDLIAVTINDPNDW---DDHMKMFNYVFEHYQTYLIAKKG-DIPK---LKGTFYESKAFIKRDITYLLTEEEKENVKINTTLLKPKKAWEKDASKIPDIVGHMEIMFNDATIAKVPIYYENERHQKPKKQFFETFKSIFLNAAGGAKWSI
4K91 Chain:B ((8-330))--------------------------APPQLAAKSYVLMDGESGQVLVENNGDQRLPPASLTKLMTAYIATKEIEAGRIGENDLVTVSEHAWRTGGSRMFIKVGSQVSVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADMMNTTAQKLGLTNSHFMDATGLPN-PDHYSSARDMAVLARAII----YGEPSHYAIYAQK--EFLWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCLVASAVRDGQRMIAVVFGTNSEQARAAETQKLLTYGFRFFESRNFYKKGTELTKGLVWKGSEHEVKAGLAEDLTMTLPRGQMQKLQA-SMVLEPQLMAPIQQGQ---VIGKVEVKLDDKVI--------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4K91.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1725 83069 48.16 270.58
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : 48.16
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_4K91.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K91-query.scw
PDB file : Tito_Scwrl_4K91.pdb: