Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSLEEKTIAKEQIFSGKVIDLYVEDVELPNGKASKREIVKHPGAVAVLAVTDEGKIIMVKQFRKPLERTIVEIPAGKLEKGEEPEYTALRELEEETGYTAKKLTKITAFYTSPGFADEIVHVFLAEELSVLEEKRELDEDEFVEVMEVTLEDALKLVESREVYDAKTAYAIQYLQLKEALQAQK
5C7Q Chain:B ((3-173))--HLEEKTLSTRQIFKGRYLKIEQDQVQAPDGRTYTREYILHPGAAMMIPLLPNGNVVMIHQYRHAVKKVFLEFPAGKRDHNEETLLTAKRELLEETGYEAKDWKFLTTIHPVIGYSNEHIDLYLARDLTHLEQR--LDQGEFIEVVEVKPADLMQLVLEGKVSDVKTQIGAFWL----------


General information:
TITO was launched using:
RESULT:

Template: 5C7Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 752 -59076 -78.56 -345.47
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain B : 0.84

3D Compatibility (PKB) : -78.56
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_5C7Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C7Q-query.scw
PDB file : Tito_Scwrl_5C7Q.pdb: