Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPHVKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETGK
1JL3 Chain:D ((4-139))---KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCG------------VKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETGK


General information:
TITO was launched using:
RESULT:

Template: 1JL3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 615 -67115 -109.13 -541.25
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain D : 0.96

3D Compatibility (PKB) : -109.13
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.96
QMean score : 0.675

(partial model without unconserved sides chains):
PDB file : Tito_1JL3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JL3-query.scw
PDB file : Tito_Scwrl_1JL3.pdb: