Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------MKIRGLDQFIQSLDRASRGGLKRKYEQWLE------SMGFE-FLDIIQDEIIRTKTVDTRRLLNSFQKGDQD-NIFSMTEGSLKLDVGTNLDYASYVNDGHFTI----------DPSKNQDR---RWVPGRWKG-DRFEYD-PAEKNSGMLLKFRWV---DGSGFWDNAMAIFQLMFERSLER-K-LQQWIYEEF----------
3WOZ Chain:A ((645-869))TEDVAEVLNRCASSNWSERKEGLLGLQNLLKNQRTLSRIELKRLCEIFTRMFADPHGKVFSMFLETLVDFIQVHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPNDLQFNILMRFTVDQTQTPSLKVKVAILKYIETLAKQMDPRDFTNSSETRLAVSRVITWTTEPKSSDVRKAAQSVLISLFELNTPEFTMLLGALPKTFQDGATKLLHN


General information:
TITO was launched using:
RESULT:

Template: 3WOZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 637 23818 37.39 142.62
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 37.39
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.097

(partial model without unconserved sides chains):
PDB file : Tito_3WOZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WOZ-query.scw
PDB file : Tito_Scwrl_3WOZ.pdb: