Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKATIVLDAKGLACPMPIVKTKKRMKDLKAGEVLEIHATDKGSTADLEAWAKSTGHEYLGTEAEGEILRHFLRKGGEHSSENASSIPEISLEAFKQKVDSDESLNILDVREIEEYEKAHIPGVVHIPLGEVEKRANELNENDEIYIICHSGRRSEMAARTMKKQGFKKVINVVPGMRDWTGKTE
4OCG Chain:B ((477-561))----------------------------------------------------------------------------------------------FDQIDNLSEDQLLLDVRNPGELQNGGLEGAVNIPVDELRDRMHELPKDKEIIIFCQVGLRGNVAYRQLVNNGY-RARNLIGGYRTY-----


General information:
TITO was launched using:
RESULT:

Template: 4OCG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 375 -50710 -135.23 -596.59
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -135.23
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.648

(partial model without unconserved sides chains):
PDB file : Tito_4OCG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OCG-query.scw
PDB file : Tito_Scwrl_4OCG.pdb: