Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNLAFLFPGQGSQFVGMGKSFWNDFVLAKRLFEEASDAISMDVKKLCFDGDMTELTRTMNAQPAILTVSVIAYQVYMQEIGI----KPHFLAGHSLGEYSALVCAGVLSFQEAVKLIRQRGILMQNADPEQLGTMAAITQVYIQPLQDLCTEISTEDFPVGVACMNSDQQHVISGHRQAVEFVIKKAERMGANHTY-LNVSAPFHSSMMRSASEQFQTALNQYSFRDAEWPIISNVTAIPYNNGHSVREHLQTHMTMPVRWAESMHYLLLHGVTEVIEMGPKNVLVGLLKKITNHIAAYPLGQTSDLHLLSDSAERNENIVNLRKKQLNKMMIQSIIARNYNKDAKTYSNLTTPLFPQIQLLKERVERKEVELSAEELEHSIHLCQLICEAKQLPTWEQLRILK
3QAT Chain:B ((8-310))----AFTFPGQGSQLIGMGKVLTEQFVAARMVFEEVDDALSEKLSDIIFEGPADVLTLTANAQPALMAVSMAVIRV-MEQLGLNVEKKVKFVAGHSLGEYSALCAAGTFSLTDTARLLRIRGNAMQAAVAVGEGSMAALIGLDEKDVEEIC-EIVAEEGLCQIANDNGGGQIVISGEAKAVETAVEVASQKGAKRAVLLPVSAPFHSALMQPAANAMKNALLTVNKTAPIVPLIANVSVIPESDPERIVSLLVQQVTGRVRWRETIEWISANGVNTLFEIGSGKVLTGLARRINKDIKALTVGTAEEIE------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3QAT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1811 -63095 -34.84 -211.73
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -34.84
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_3QAT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QAT-query.scw
PDB file : Tito_Scwrl_3QAT.pdb: