Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRFSTAYLLLGILCSAAVFLIGAPSRALGAEVEHYEPLQVHVQLEKVYLDGDVSIEHKHEKVFSMDDFWAAYAGWTLVEQKKGYVLFRKQMDDISPLSKVNGYIGVSDNGVISTFHGRPEPASEPIQSFFQIDLERLESHMQKNLLKGIPFRTKAEFEDVIEHMKTYSG
1FSD Chain:? ((1-28))--------------------------------------------------------------------------------------------------------------------------------------------QQYTAKIKGRTFRNEKELRDFIEKFKGR--


General information:
TITO was launched using:
RESULT:

Template: 1FSD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 58 -1315 -22.67 -46.96
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -22.67
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.696

(partial model without unconserved sides chains):
PDB file : Tito_1FSD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1FSD-query.scw
PDB file : Tito_Scwrl_1FSD.pdb: