Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMPRTIIEKIWDQHIVKHGEGKPDLLY--IDLHLIHEVTSPQAFEGLRQKG-RKVRRPQNTFATMDHNIPTVNRFEIKDEVAKRQVTALERNCEEFGVRLADLHSVDQGIVHVVGPELGLTLPGKTIVCGDSHTSTHGAFGALAFGIGTSEVEHVLSTQTLWQQRPKTLEVRVDGTLQKGVTAKDVILAVIGKYGVKFGTGYVIEYTGEVFRNMTMDERMTVCNMSIEAGARAGLIAPDEVTFEYCKNRKYTPKGEEFDKAVEEWKALRTDPGAVYDKSIVLDGNKISPMVTWGINPGMVLPVDSEVPAPESFSAEDDKKEAIRAYEYMGLTPHQKIEDIKVEHVFIGSCTNSRMTDLRQAADMI-KGKKVADSVRAIVVPGSQSVKLQAEKEGLDQIFLEAGFEWRESGCSMCLSMNNDVVPEGERCASTSNRNFEGRQGK-GARTHLVSPAMAAMAAIHGHFVDVRKFYQEKTVV
4NQY Chain:B ((22-442))---MTIVEKILAKASGKKEVSPGDIVMANIDVAMVHDITGPLTVNTLKEYGIEKVWNPEKIVILFD------------NHILMRKFV------KEQGIKY--FYDIREGVCHQVLPEKGHVAPGEVVVGADSHTCTHGAFGAFATGIGSTDMAHVFATGKLWFKVPETIYFNITGDLQPYVTSKDVILSIIGEVGVDGATYKACQFGGETVKKMSIASRMTMTNMAIEMGGKTGIIEPDEKTIQYVK-EAMKKHGTE-----RPFEVIKGDEDAEFAEVYEIEADKIEPVFACPHNV-------------------DNVKQA------------REVAGKPIDQVFIGSCTNGRLEDLRMAIKIIEKHGGIADDVRVVVTPASREEYLKALKEGIIEKFLKYGCVVTNPSCSACMGSLYGVLGPGEVCVSTSNRNFRGRQGSLEAEIYLASPITAAACAVKGELVDPRD--------


General information:
TITO was launched using:
RESULT:

Template: 4NQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2512 26198 10.43 64.85
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : 10.43
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.431

(partial model without unconserved sides chains):
PDB file : Tito_4NQY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NQY-query.scw
PDB file : Tito_Scwrl_4NQY.pdb: