Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQKDHVGAVYELLNEAAIMIKNELQISYIEALAEAGEMYFLEKTDQLKLPADQKTKQLQALLEKAEFGTYEHEWVRKAFQLAVLKGMKDISHPNRQMTPDTIGLFISYLVNKFMADK--KELTILDPALGTGNLLFTVLNQLSEK-TANSFGIEIDDVLLKIAYAQANLL------KKELELFHQDSLEPLFIDP--VDTVIC-DLP--VGYYPNDEGAEAFELKADE---------GHSFAHHLFIEQSVKHTKPGGYLFFM-IPNHL-FESSQSGKLKQFFKDKVHINALLQLPKSIFKDEAHAKSILVLQKQGENTKAPGQILLANLPSFSNQKAMLDMMAQFDEWFKKEK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3S1S Chain:A ((6-875))LNNCVFSYLPSYGDDEVSVYHPICEAALNQALVNTGLDSTYEVVHHELVGSIEADFVIKNKQTKKYLLIVEVKRTKSQVSSTRYRLQAQSYVREANIKVEQHYYCLTNLEIIDFFKHDPNKPVVSQQIIEPSPIVVGNFSDTVSEFYNRLVEAFQNIIDISVNDAGTYKSSTANLVDILENRKDNSTSWHQALVVAGYEYIRGVLRGQNVEVPTRDAIYF--------KSRPGRLLEEGRKIDFNVLFSEPEPNTNDNDIWNVNLLSSLNDLGRRILTGDELAELIHDIATRGRGHEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFLVGNFGLEHIFLYPREGLFEEVIKDTVVFVGRKGSSVE---EIEVLDSFTPLEQVDLHNLKRALSNSSNEQIIQPMGMELRKEKREELENRVTVGWRHITSNGRVAEEWITNNLESHCIRLVASDYDLRRGRVGNKGASDLLFINSKKKLWDLLDESVPRDWLYPALRKVNEINTPIFNEDATPVRFLCPPNSAYQDGTGESIILDKILDVYVDFQVYKSKQKKFEKSKEELKEILYKESDFYSSEHTVFIPRALRRSARAFINEQKVFCSTNALEVFGGNSEEMWLLLSWLSSVFAQLQFEAMAKDQEGERKLEKKSIQNLYIPNLGDIDDVLKQDLIEEVREIHFFDLCRPRVRKLDLLWAKVFWSGNEMSKTKEAAELLEDLVFERYPEGSQ


General information:
TITO was launched using:
RESULT:

Template: 3S1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1507 73865 49.01 232.28
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : 49.01
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.302

(partial model without unconserved sides chains):
PDB file : Tito_3S1S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3S1S-query.scw
PDB file : Tito_Scwrl_3S1S.pdb: