Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKHTFVLFLSLILLVLPGCSAEKSSADTAKKTLTIYSTMSTDSERDTFRKLAAAFEKEHSDIHVSLHFPGNDYENMMRVRMAANDLPDLFDTHGWGKIRYGEYTADLRDMKWTQDLDPNLNSILKNKSGKVYAYPINQAKDGLAYNRNILDRYGIAPPETMDDFIKALRTIKEKSKGSIVPFWFAGYDKSSFAQYYDQFATPLLITDPAHNEKKQLINGTFQWSKFTYLSEILKQMQKEKLINIDAVTAKKSQLIELMAQNKIAFTMQGGTLGQDVAQINPNVKVGIIPTPAIHPGDDPIWIGGERYTLAAWKDSPQLKEAKDFIAFMARPANAKQMAEATSLPSGLTNVKADIFYANDYEYYQDVKVEPYFDRLYLPNGMWDVLGTVGQELAADILAPQDISQKLGREYKRLREQSETQGAENNE
4RK9 Chain:B ((16-399))------------------------------VTLTMFSTMTNDSEKNTLRSIADDFEKENEGIKIDISFPGPDYENMLRVKMAANDMPDLFDTHGWAKIRYGEYTADLKDMDWVKHLDPNLDPILKDEKGKVYAYPFNQAKDGIVYNAGLLKKYGLKPPQTLDELMHALETIKEKSNGSVIPFWFAGSDKGALAQFYDQLATPLLITDDRRNEKKALENGTFDWSDYTLLAETFKEMQEKQLINKDILTAKPSQLVELMAQEKIGFTLSVTSIGPDTREVNPDIQLGVMPTPAVYEGDKPSWIGGERHTVAVWKDSEHLEEAKRFIEFAAQPKYVKKIAEATSFPQALTNTEAENYYSKFYDQYEEIKIEPYFDRVYLPSGMWDVMGTTGQELLAGTLTPKQVSEKMKQEYSRLQ------------


General information:
TITO was launched using:
RESULT:

Template: 4RK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2116 -146946 -69.45 -382.67
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain B : 0.88

3D Compatibility (PKB) : -69.45
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_4RK9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RK9-query.scw
PDB file : Tito_Scwrl_4RK9.pdb: