Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAKFEVGSVYTGKVTGLQAYGAFVALDEETQGLVHISEVTHGFVKDINEHLSVGDEVQVKVLAVDEEKGKISLSIRATQAAPE-KKESKPRKPKAAQVSEEAST---PQGFNTLKDKLEEWIEMSNRKDLIKK
4NNI Chain:B ((16-128))------IGQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK--QANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDA---ETNEWLE----------


General information:
TITO was launched using:
RESULT:

Template: 4NNI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 418 -34616 -82.81 -317.57
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -82.81
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_4NNI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NNI-query.scw
PDB file : Tito_Scwrl_4NNI.pdb: