Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIKKFAKQATVLTFTTALLAGGATQAFAKETNQKPYKETYGISHITRHDMLQIPEQQKNEKYQVPEFDSSTIKNISSAKG---------LDVWDSWPLQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVS-ASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMKPLIASNTVTDEIERANVFKMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYADKQSTFAPSFLLNIKGKKTSVVKDSILEQGQLTVNK
3OM7 Chain:D ((6-453))---------------------------------SKDFNNSYGISHITRDNMVKIPQQQNSDQFKVPAFDESTIKNIASAKGKNASGNTIDLDVWDSWPLQNADGTVATYHGYQIVFALAGDPKDSNDTSVYLFYKKAGDKSIDSWKNAGRVFKDSDKFVPNDPHLKNQTQEWSGSGTLTKDGKVRLFYTDYSGKQYGKQTLTTAQVNMSQPNDNTLKVDGVEDYKSIFDGDGKIYQTVQQFIDEGGWDTGDNHTLRDPHYIEDNGHKYLVFEANTGTEDGYQGEDSLYNRAYYGGNNPFFQSEKKKLLEGSNKEKASLANGALGIIELNDDYTLKKVMKPLITSNTVTDEIERANIFKKDGKWYLFTDSRGSKMTIDGIGQDDVYMLGYVSNTLTGKYKPLNDTGLVLHMDLDPNDKTFTYSHFAVPQTKGDNVVITSYMTNRGFYEDNHSTFAPSFLVNIDGSKTSVVKDRVLEQGQLTV--


General information:
TITO was launched using:
RESULT:

Template: 3OM7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 2683 185491 69.14 423.50
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain D : 0.92

3D Compatibility (PKB) : 69.14
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.92
QMean score : 0.804

(partial model without unconserved sides chains):
PDB file : Tito_3OM7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OM7-query.scw
PDB file : Tito_Scwrl_3OM7.pdb: