Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVFDVHKFDMKKEQDFLQVQFNLKNRINLSPTIHPDSINTCAGVDLAYWEQDGEPYGVCCIIVIDADTKEVIEKVHSMGRISVPYVSGFLAFRELPLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFVTPEIEVGAYTDIIIDGEVYGRALRTRRDVKPIFLSCGNYIDLDSSYQITMSLINQESRLPIPVRLADLETHVLRTFYQKNHV
3GOC Chain:B ((14-217))-------------EEEARAVQDELRGRVILDEPGPPPGTGRVTGVDVAY--DDERDVVVAAAVVLDAATLDVVAEATAVGEVSFPYVPGLLAFREIPTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAKNPFTFS---YEDPGAPRGSAAPLLAGADEVGRALRTQSGVKPVFVSVGHRVDLDHACAHTLAL-TPKYRIPETTRRAD---------------


General information:
TITO was launched using:
RESULT:

Template: 3GOC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1220 -130751 -107.17 -640.94
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -107.17
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_3GOC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GOC-query.scw
PDB file : Tito_Scwrl_3GOC.pdb: