Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTRSYENEEGVNVYVTEVLADTVRFMDPKPREKAAD 3VDY Chain:B ((4-108)) MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR--------NVYVTEVLADTVRFMDP--------

General information: TITO was launched using: RESULT: Template: 3VDY.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 392 -44702 -114.04 -460.85 target 2D structure prediction score : 0.63 Monomeric hydrophicity matching model chain B : 0.96 3D Compatibility (PKB) : -114.04 2D Compatibility (Sec. Struct. Predict.) : 0.63 1D Compatibility (Hydrophobicity) : 0.96 QMean score : 0.473

(partial model without unconserved sides chains): PDB file : Tito_3VDY.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3VDY-query.scw PDB file : Tito_Scwrl_3VDY.pdb: