Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAISSAADIWDHI-----SESTDVVAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGAAESYEARCRHHHEVPGKSKK
2B8T Chain:B ((11-200))------IGWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI----------------LPSVEVESAPEILNYIMSNSFNDETKVIGIDEVQFFDDRICEVANILAENGFVVIISGLDKNFKGEPFGPIAKLFTYADKITKLTAICNECGAEATHSLRKIDGKHADYNDDIVKIGCQEFYSAVCRHHHKVPNR---


General information:
TITO was launched using:
RESULT:

Template: 2B8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 835 -23042 -27.59 -135.54
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -27.59
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.375

(partial model without unconserved sides chains):
PDB file : Tito_2B8T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2B8T-query.scw
PDB file : Tito_Scwrl_2B8T.pdb: