Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNINIVTIGKLKEKYLKQGIEEYTKRLSAYAKIDIIELPDEKAPENLSDQDMKIIKDKEGDRILSKISPDAHVIALAIEGKMKTSEELADTIDKLATYGKSKVTFVIGGSLGLSDTVMKRADEKLSFSKMTFPHQLMRLILVEQIYRAFRINRGEPYHK
4FAK Chain:A ((5-163))MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAYHK


General information:
TITO was launched using:
RESULT:

Template: 4FAK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 716 -94201 -131.57 -592.46
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.92

3D Compatibility (PKB) : -131.57
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.92
QMean score : 0.743

(partial model without unconserved sides chains):
PDB file : Tito_4FAK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FAK-query.scw
PDB file : Tito_Scwrl_4FAK.pdb: