Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKVHQSACPLNCWDSCGFLVTVD-DGKVTKVDGDPNHP-ITEGKICGRGRMLETKTNSPDRLRYPMKKQN-----GEFVRISWEQALDEIADKLREIKETSETTAVLHSHDYA--NNGLLKALDQRFFNGYGGVTEIV--GSICWGSGIEAQSWDFGRSYGHGPLDIYNSKHVVVWGRNVSRTNMHL-YHHLQQVKKKGATITVIDPIFNPTAKLADRYISVKPGMDGWLAAAVLKVLIEMGRTDETFISEHSVGFDDVKELLKTVSLEEFIVKTETSMEELEYLAGLYAD-GPVSTFMGLGMQRYKNGGGTIRWIDALVAASGNVGIKGGGANFGNVQ-IGES--F------A------KTKL-TLP-----EL---------KTTSRSF--SM--MTQAEEVL--T-AADPA-IEMIIVTCGNPLTQVPNTNKVRQAFEKVPMTVAIDSIMTDTAELCDYVLPTATVFEEEDIYYSSMYHHYVQYGKKLVEPQGEAKSDSWIWSELAKRLGFGELFE-YSTQEFLEMGLSSLEAEDVTLERLKEKGHLPLPVKQ-VPWDDYQFLTPSGKFEFTSSLAEQKGFSGSLQLNVPEESV-FHNEE-------LAGKYPYTLLSIH-PQRSNHSQ--HVPFIEKL-QHVQVDISPDIAAGQDLQDGDEVVIFNDRGSMKGKVKVMKQAHAKTINIDEGMWAAF-------------GGS-VNALTNDT-NSDN-GMGSTLFD-CLVGLKKA
2E7Z Chain:A ((1-727))---KKHVVCQ-SCDINCVVEAEVKADGKIQTKSISEPHPTTPPNSICMKSVNADTIRTHKDRVLYPLKNVGSKRGEQRWERISWDQALDEIAEKLKKIIAKYGPESLGVSQTEINQQSEYG--TLRRFMNLLG-SPNWTSAMYMCIGNTAGVHRVTHG--SYSFAS-FADSNCLLFIGKNLSNHNWVSQFNDLKAALKRGCKLIVLDPRRTKVAEMADIWLPLRYGTDAALFLGMINVIINEQLYDKEFVENWCVGFEELKERVQEYPLDKVAEITGCDAGEIRKAAVMFATESPASIPWAVSTDMQKNSCSAIRAQCILRAIVGSFVN-GAEILGAPHSDLVPISKIQMHEALPEEKKKLQLGTETYPFLTYTGMSALEEPSERVYGVKYFHNMGAFMANPTALFTAMATEKPYPVKAFFALASNALMGYANQQNALKGLMNQDLVVCYDQFMTPTAQLADYVLPGDHWLERPVVQPNWEGIPFGNTSQQVVEPAGEAKDEYYFIRELAVRMGLEEHFPWKDRLELINYRISP---TGMEWEEYQKQYTYMSKLPDYFGPEGVGVATPSGKVELYSSVFEKL--------GYDPLPYYHEPLQTEISDPELAKEYPLILFAGLREDSNFQSCYHQPGILRDAEPDPVALLHPKTAQSLGLPSGEWIWVETTHGRLKLLLKHDGAQPEGTIRIPHGRWCPEQEGGPETGFSGAMLHNDAMVLSDDDWNLDPEQGLPNLRGGILAKAYKC


General information:
TITO was launched using:
RESULT:

Template: 2E7Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3985 64569 16.20 100.11
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 16.20
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_2E7Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2E7Z-query.scw
PDB file : Tito_Scwrl_2E7Z.pdb: