Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKSKVRKKNDFTVSAVSRTPMKVKVGPSSVWFVSLFIGLMLIGLIWLMVFQLAAIGSQAPTALNWMAQLGPWNYAIAFAFMITGLLLTMRWH
3MK7 Chain:C ((51-79))
-------------------------DNPLPRWWFLLFIGTLVFGILYLVLYPGL---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3MK7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12766 for 111 contacts (-115.0/contact) +
2D Compatibility (PS) -3048 + (NN) -2731 + (LL) 5132
1D Compatibility (HY) -4800 + (ID) 400
Total energy: -18613.0 ( -167.68 by residue)
QMean score : 0.289
(partial model without unconserved sides chains):
PDB file :
Tito_3MK7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MK7-query.scw
PDB file :
Tito_Scwrl_3MK7.pdb
: