Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLSTAFSQMFGIDYPIVSAPMDLIAGGELAAAVSGAGGLGLIGGGYGDRDWLARQFDLAAG---APVGCGFITWSLARQPQLLDLALQYEPVAVMLSFGDPAVFADAIKSAGTRLVCQIQNRTQAERALQVGADVLVAQGTEAGGHGHGPRSTLTLVPEIVDLVTARGTDIPVIAAGGIADGRGLAAALMLGAAGVLVGTRFYATVEALSTPQARDPLLAATGDDMCRTTIYDQLRRYPWPQGHTMSVLSNALTDQFEDTELDILHREEAMARYW---------RAVAARDYSIANVTAGQAAGLVNAVLPAADVITGMAQQAARTLTAMRAV |
| 2Z6J Chain:B ((1-310)) | --MKTRITELLKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGVNIMLLSPFVE-DIVDLVIEEGVKVVTTGAGNPSKYMERFHEAGIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGH-IGKLTTMTLVRQV-----ATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNAHPNYKEKILKARDID---TTISAQ----------AVRAIKNQLTRDFELAEKDAF----------EQMGAGALAKAVVHGDVDGGSVMAGQIAGLVSKEETAEEILKDLYYGAAKKI------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217563 for 2611 contacts (-83.3/contact) +
2D Compatibility (PS) -30968 + (NN) -11981 + (LL) 3360
1D Compatibility (HY) -18400 + (ID) 5350
Total energy: -280902.0 ( -107.58 by residue)
QMean score : 0.469
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