Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAHPCATDPELWFGYPDDDGSDGAAKARAYERSATQARIQC--------LRRCPLLQQRRCAQHAVEHRVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLPDNAALLARNEGLEVTPVPGVVVHLPIAQVGPQPAA------------------------------------------------------ |
4YCI Chain:A ((60-256)) | -AEPPQYMIDLYNRYTTDKSSTPASN---IVRSFSVEDAISTAATEDFPFQKHILIFNISIPRHEQITRAELRLYVSCQNDVDSTHGLEGSMVVYDVLEDSETWDQATGTKTFLVSQDIRDEGWETLEVSSAVKRWVRADSTTNKNKLEVTVQSHRESCDTLDISVPPGSKNLPFFVVFSNDRSNGTKETRLELKEMIGHE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5799 for 764 contacts (-7.6/contact) +
2D Compatibility (PS) -13421 + (NN) 1964 + (LL) 596
1D Compatibility (HY) 800 + (ID) 1200
Total energy: -17060.0 ( -22.33 by residue)
QMean score : -0.013
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