Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAHPCATDPELWFGYPDDDGSDGAAKARAYERSATQARIQC--------LRRCPLLQQRRCAQHAVEHRVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLPDNAALLARNEGLEVTPVPGVVVHLPIAQVGPQPAA------------------------------------------------------
4YCI Chain:A ((60-256))-AEPPQYMIDLYNRYTTDKSSTPASN---IVRSFSVEDAISTAATEDFPFQKHILIFNISIPRHEQITRAELRLYVSCQNDVDSTHGLEGSMVVYDVLEDSETWDQATGTKTFLVSQDIRDEGWETLEVSSAVKRWVRADSTTNKNKLEVTVQSHRESCDTLDISVPPGSKNLPFFVVFSNDRSNGTKETRLELKEMIGHE


General information:
TITO was launched using:
RESULT:

Template: 4YCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5799 for 764 contacts (-7.6/contact) +
2D Compatibility (PS) -13421 + (NN) 1964 + (LL) 596
1D Compatibility (HY) 800 + (ID) 1200
Total energy: -17060.0 ( -22.33 by residue)
QMean score : -0.013

(partial model without unconserved sides chains):
PDB file : Tito_4YCI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YCI-query.scw
PDB file : Tito_Scwrl_4YCI.pdb: