Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQAGSSVAVIQERQALLARQHDAVAEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQDQLAVDTPMGAREFQTFLVAKQREIVAVVAAAHELDRAKSAVLKRLRAQYTEPAR
3GWK Chain:C ((43-89))
-ENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQTD------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4649 for 179 contacts (26.0/contact) +
2D Compatibility (PS) -5565 + (NN) -5227 + (LL) 7252
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -341.0 ( -1.91 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_3GWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GWK-query.scw
PDB file :
Tito_Scwrl_3GWK.pdb
: