Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKWLGAPLARGVSTATRAKDSDRQDACRILDDALRDGELSMEEHRERVSAATKAVTLGDLQRLVADLQVESAP----AQMPALKSRAKRTELGLLAAAFVASVLLGVGIGWGVYGNTRSPLDFTSDPGAKPDGIAPVVLTPPRQLHSLGGLTGLLEQTRKRFGDTMGYRLVIYPEYASLDRVDPADDRRVLAYTYRGGWGDATSSAKSIADVSVVDLSKFDAKTAVGIMRGAPETLGLKQSDVKSMYLIVEPVKDPTTPAALSLSLYVSSDYGGGYLVFAGDGTIKHVSYPS |
1XKP Chain:A ((33-268)) | --QFRGESVQIVSGTLQSIADMAEEVT-ELSLDRLSDSQARVSDVEEQVNQYLSVPELEQQNVSELLSLLSNSPNISLSQLAYLEGSEEPSEQFMLCGLRDA-------------------------------------LGRPELAHLSHLVEQALVSMAEEQGETIVLGARITPEAYRESQSGV-NPLQPLRDTYRDAVMGYQGIYAIWSDLQ--RFPNGDIDSVILFLQALSADLQSQQSG------------SGRELGIVISDLQLEF---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9869 for 1376 contacts (-7.2/contact) +
2D Compatibility (PS) -22096 + (NN) -3995 + (LL) 3200
1D Compatibility (HY) -1200 + (ID) 1700
Total energy: -35660.0 ( -25.92 by residue)
QMean score : 0.308
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