Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEIGPSLRYATAKVNKASRSGGFGSGSRPAPAQTSSASGDDPWGSAPASGSFGGGDDEPPF
1UE5 Chain:B ((3-120))
--GDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQT-EWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRS--------RTVIEVEVDEIGPSLRYATAKVNKA--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UE5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50725 for 681 contacts (-74.5/contact) +
2D Compatibility (PS) -11808 + (NN) -3708 + (LL) -728
1D Compatibility (HY) -12800 + (ID) 5400
Total energy: -85169.0 ( -125.06 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_1UE5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UE5-query.scw
PDB file :
Tito_Scwrl_1UE5.pdb
: