Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MITRYKP----ESGFVARSGGPDRKRPHDWIVWHFTHADNLPGIITAGRLLADSAVTPTTEVAY------NPVKELRRHK------------------VVAPDSRYPASMASDHVPFYIAARSPMLYVVCKGHSGYSGGAGPLVHLGVALGDII----DADLTWCASDGNAAASYTKFSRQVDTLGTFVDFDLLCQRQWHNTDDDPNRQ---SRRAAEILVYGHVPFELVSYVCCYNTETMTRVRTLLDPVGGVRKYVIKPGMYY- |
| 1T8H Chain:A ((4-275)) | MPDIFQQEARGWLRCGAPPFAGAVAGLTTKHGGE-SKGPFASLNMGLHVGDDRTDVVNNRRRLAEWLAFPLERWVCCEQVHGADIQKVTKSDRGNGAQDFATAVPGVDGLYTDEAGVLLALCFADCVPIYFVAPSA--GLVGLAHAGWRGTAGGIAGHMVWLWQTREHIAPSDIYVAIG---PAIGPCCYTVDDRVVDSLRPTLPPESPLPWRETSPGQYALDLKEANRLQLLAAGVPNSHIYVSERCTSCEEALFFSHRRDRGTTGRMLAFIGRREE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81329 for 1805 contacts (-45.1/contact) +
2D Compatibility (PS) -23690 + (NN) -5592 + (LL) -20
1D Compatibility (HY) 400 + (ID) 1650
Total energy: -111881.0 ( -61.98 by residue)
QMean score : 0.196
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