Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTGQRWRGTLPGRRPWTRPAPATCRRHLAFVELRHYFARVMSSAIGSVARWIVPLLGVAAVASIGVIADPVRVVRAPALILVDAANPLAGKPFYVDP-ASAAMVAARNANPPNAELTS--VANTPQSYWLDQAFPPATVGGTVARYTGAAQAAGAMPVLTLYGIPHRDCGSYASGGFATGTDYRGWIDAVASGLGSSPATIIVEPDALAMADCLSPDQRQERFDLVRYAVDTLTRDPAAA-VYVDAGHSRWLSAEAMAARLNDVGVGR-ARGFSLNVSNFYTTDEEIGYGEAI-SGLTNGS-HYVIDTSRNGAGPAPDAPLNWCNPSGRALGAPPTTATAGAHADAYLWIKRPGESDGTCGRGEPQAGRFVSQYAIDLAHNAGQ |
| 3RPT Chain:A ((3-271)) | ----------------------------------------------------------------------------------------------PFYVNPNMSSAEWVRNNPNDPRTPVIRDRIASVPQGTWHNQ-H---QITGQVDALMSAAQAAGKIPILVV----NP---------FEEG---KQWIDEFAAGLKNRPAYIIVDPG---------------AWRFAAYAGKALKAGSSQARIYFDAGHSAWHSPAQMAAALQRADISNSAHGIATNTSNYRWTADEVAYAKAVLSAIGNPSLRAVIDTSRNGNGPAGNES---CDPSGRAIGTPSTTNTGDPMIDAFLWIKLPGEADG-CIAG---AGQFVPQAAYEMA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114700 for 2049 contacts (-56.0/contact) +
2D Compatibility (PS) -25953 + (NN) -15460 + (LL) 8684
1D Compatibility (HY) -15600 + (ID) 5450
Total energy: -168479.0 ( -82.22 by residue)
QMean score : 0.543
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