Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDSIFNLLTEEQLRGRNTLKWNYFGPDVVPLWLAEMDFPTAPAVLDGVRACVDNEEFGYPPLGEDSLPRATADWCRQRYGWCPRPDWVRVVPDVLKGMEVVVEFLTRPESPVALPVPAYMPFFDVLHVTGRQRVEVPMVQQDSGRYLLDLDALQAAFVRGAGSVIICNPNNPLGTAFTEAELRAIVDIAARHGARVIADEIWAPVVYGS-RHVAAASVSEAAAEVVVTLVSASKGWNLPGLMCAQVILSNRRDAHDWD----RINMLHRMGASTVGIRANIAAYHHGESWLDELLPYLRANRDHLARALPELAPGVEVNAPDGTYLSWVDFRALALPSEPAEYLL-SKAKVALSPGIPFGAAVGSGFARLNFATTRAILDRAIEAIAAALRDIID |
| 4DQ6 Chain:B ((29-391)) | -----------------------YGTNDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTT-RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENK-IKDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEA---SYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIG-GSGYQRINLACPRSMLEEALIRIKNAIN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DQ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -266341 for 3024 contacts (-88.1/contact) +
2D Compatibility (PS) -39109 + (NN) -17771 + (LL) 2728
1D Compatibility (HY) -30800 + (ID) 5850
Total energy: -357143.0 ( -118.10 by residue)
QMean score : 0.507
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