Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTR-LTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARY-QRLLHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP
3FKH Chain:A ((3-133))
------------DNPVNILNEQEALERLQSVSLGRVVVRRSDEMDIFPVNFIVDKGAIYIRTAE--------L------NHDVLFEADEVKD--GKAWSVVVRATAEIVRKLDEIAYADTLELKPWIPTLKYNYVRIVPNEITGREFTLGE---
General information:
TITO was launched using:
RESULT:
Template:
3FKH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70675 for 802 contacts (-88.1/contact) +
2D Compatibility (PS) -13524 + (NN) -5442 + (LL) 1512
1D Compatibility (HY) -7200 + (ID) 2000
Total energy: -97329.0 ( -121.36 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_3FKH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FKH-query.scw
PDB file :
Tito_Scwrl_3FKH.pdb
: