Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGGREEYRAVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRRHRELDGSGTVRGNIKV-PAKLVVGSKFSTKMKLFGLP-YRITSRVTALKP-NELVEWSH---PL---GHRWRWEFESLSP-TL--TRVTETFDYHAAGAIKNGLKFYEMTGFAKSNAAGIEATLAKLSDQYARGRA |
| 3K3K Chain:A ((46-199)) | -----------------------------------------------------------------------DPGSCSSLHAQRIHAPPELVWSIVRRFDKPQTYKHF--IKSCSVEQNFEMRVGCTRDVIVI-SGLPANTSTERLDILDDERRVTGFSIIGGEHRLTNYKSVTTVHRFEKENRIWTVVLESYVVDMPEGNS--EDDT-----RMFADTVVKLNLQKLATVAEAMA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25082 for 968 contacts (-25.9/contact) +
2D Compatibility (PS) -15556 + (NN) -3680 + (LL) 4284
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -42684.0 ( -44.10 by residue)
QMean score : 0.365
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