Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLAQATTAGSFNHHASTVLQGCRGVPAAMWSEPAGAIRRHCATIDGMDCEVAREALSARLDGERAPVPSARVDEHLGECSACRAWFTQVASQAGDLRRLAESRPVVPPVGRLGIRRAPRRQHSPMTWRRWALLCVGIAQIALGTVQGFGLDVGLTHQHPTGAGTHLLNESTSWSIALGVIMVGAALWPSAAAGLAG----VLTAFVAILTGYVIVDALSGAVSTTRILTHLPVVIGAVLAIMVWRSASGPRPRPDAVAAEPDIVLPDNASRGRRRGHLWPTDGSAA |
4C7R Chain:B ((221-292)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACSLGLGALQIGAGL--SAANIIEDPSDWTIVGIVSVLTLAFIFSAISGVGKGIQYLSNANMVLAALLAIFVF------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36971 for 314 contacts (-117.7/contact) +
2D Compatibility (PS) -6923 + (NN) -213 + (LL) 11848
1D Compatibility (HY) -8400 + (ID) 1200
Total energy: -41859.0 ( -133.31 by residue)
QMean score : -0.002
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