Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLKVKGEGLGAQVTGV-DPKNLDDITTDEIRDIVYTNKLVVLKDVHPSPREFIKLGRIIGQIVPYYEPMYHHEDHPEIFVSSTEEGQGVPKTGAFWHIDYMFMPEPFAFSMVLPLAVPGHDRGTYFIDLARVWQSLPAAKRDPARGTVSTHDPRRHIKIRPSDVYRP-IGEVWDEINRTTPPIKWPTVIRHPKTGQEILYICATGTTKIEDKDGNPVDPEVLQELMAATGQLDPEYQSPFIHTQHYQVGDIILWDNRVLMHRAKH-GSAAGTLTTYRLTMLDGLKTPGYAA |
| 3PVJ Chain:A ((4-277)) | -TITPLSPALGAQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPEQQARFAARFGDLHIHPIYP-NVPDTPQVLVLDTA--VTDVRDNAVWHTDVTFLPTPALGAVLSAKQLPAYGGDTLWASGIAAFEALSAPLREMLDGLTATHDFTKSFPLERFGTTPQDLARWEAT-RRNNPPLSHPVVRTHPVSGRKALFVNEGFTTRINELSELES-DALLRLLFAHATR------PEFSIRWRWQENDVAFWDNRVTQHFAVDDYR-PNRRVMHRATILGDAPF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120681 for 2213 contacts (-54.5/contact) +
2D Compatibility (PS) -28992 + (NN) -10686 + (LL) 848
1D Compatibility (HY) -5200 + (ID) 3050
Total energy: -167761.0 ( -75.81 by residue)
QMean score : 0.440
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