Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCTARTAEEIFVETIAVKTRILNDRVLLEAARAIGDRLIAGYRAGARVFMCGNGGSAADAQHFAAELTGHLIFDRPPLGAEALHANSSHLTAVANDYDYDTVFARALEGSARPGDTLFAISTSGNSMSVLRAAKTARELGVTVVAMTGESGGQLAEFADFLINVPSRDTGRIQESHIVFIHAISEHVEHALFAPRQ
2X3Y Chain:H ((41-217))
----------------VMAAMLADERLLATVRKVADACIASIAQGGKVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLPAVALTTDTSILTAIGNDYGYEKLFSRQVQALGNEGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRG-EMRELCDLLLEVPSADTPKIQEGHLVLGHIVCGLVEHSIFG---
General information:
TITO was launched using:
RESULT:
Template:
2X3Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129871 for 1490 contacts (-87.2/contact) +
2D Compatibility (PS) -19464 + (NN) -9830 + (LL) 1904
1D Compatibility (HY) -16800 + (ID) 3850
Total energy: -177911.0 ( -119.40 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_2X3Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X3Y-query.scw
PDB file :
Tito_Scwrl_2X3Y.pdb
: