Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASDFGPRIADLVEVAATRLPEAPALVVTADRIAISHRDLARLVDELAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLVVVPLDPALPITEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLDAATEPNPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIASLLATLASGGAVSLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERSATEPS-GRKPAALRFIRSCSAPLTAQAALALQTEFAAPVVCAFGMTEATHQVTTTQIEGIDQTETPVVSTGLVGRSTGAQIRIVGSDGLPLPA---GAVGEIWLRGTTVVRGYLGDPTITAANFT-DGWLRTGDLGSLSAAGDLSIRGR-IKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPHQLYGEAVAAVIVPRESAPPTR-EELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAVAERFGHSV |
| 3NYR Chain:A ((156-491)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------DPALVVYTSGTTGPPKGAVIPRRALATTLDALADAWQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVR--HLGRFSTEGAARELND-GATMLFGVPTMYHRIAETLPADPELAKALAGARLLVSGSAALPVHDHERIAAATGRRVIERYGMTE-TLMNTSVRADGEPRAGTVGVPL------PGVELRLV-----PIAALDGESVGEIQVRGPNLFTEYLNRPDATAAAFTEDGFFRTGDMAVRDPDGYVRIVGRKATDLIKSGGYKIGAGEIENALLEHPEVREAAVTGEPDPDLGERIVAWIVPADPAAPPALGTLADHVAARLAPHKRPRVVRYLDAVPR------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163184 for 2727 contacts (-59.8/contact) +
2D Compatibility (PS) -34018 + (NN) -9493 + (LL) 11356
1D Compatibility (HY) -15600 + (ID) 5600
Total energy: -216539.0 ( -79.41 by residue)
QMean score : 0.378
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