Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAPKLVIGANGFLGSHVTRQLVADCAPQKGEVRAMVR-PAANTRSIDDLPLTRFHGDVFDTATVAEAMAGCDDVYYCVVDTRAWLRDPSPLFRTNVAGLRNVLDVATDASLRRFVFTSSYATVGRRR-GHVATEEDRVD--TRKVTPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGGGDWGRTPHGAFIAGAVFGRLPFTMRGIRLEAVGVDDAARALILAAERGRNGERYLISERMMPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTGKDTELSLASVRMMRSEADVDHGKAVRELGWQPR-PVEESIREAARFWAAMRTVGKDPAAS |
| 2X4G Chain:A ((11-337)) | AHVKYAVLGATGLLGHHAARAIRA----AGHDLVLIHRPSSQ-IQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFS------------EEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR-NGLPVVIGIPGMVLGELDIGP-TTGRVITAIGNGEMTHYVAGQRN-VIDAAEAGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRL----------------EVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNG--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2X4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -180716 for 2471 contacts (-73.1/contact) +
2D Compatibility (PS) -31665 + (NN) -11380 + (LL) 2288
1D Compatibility (HY) -12000 + (ID) 3600
Total energy: -237073.0 ( -95.94 by residue)
QMean score : 0.585
|
|
|