Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGMDQQPNPPDVDAFLDSTLVGDDPALAAALAASDAA--ELPRIAVSAQQGKFLCLLAGAIQARRVLEIGTLGGFSTIWLARGAGPQGRVVTLEYQPKHAEVARVNLQRAGVADRVEVVVGPALDTLPTLAG-GPFDLVFIDADKENNVAYIQWAIRLARRGAVIVVDNVIRGGGILAESDDADAVAARRTLQMMGEHPGLDATAIQTVGRKGWDGFALALVR
4PCL Chain:B ((18-181))
------------DEYLNKLFAVDTEG---ALKAHKTAPSELRMAQLGTVEGQMLQLLIRMAGIHSIVEVGTCVGFSAICMAHALPSKGHIYTIEKDYENVVTANQNIVNCKLEDKITVLHGEALAQLNTLKEMAPFDMIFIDANKSSYLAYLNWAKMYIRKGGLIVADNTFLFGSVFDE--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4PCL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105305 for 1290 contacts (-81.6/contact) +
2D Compatibility (PS) -17950 + (NN) -9907 + (LL) 3428
1D Compatibility (HY) -13600 + (ID) 2700
Total energy: -146034.0 ( -113.20 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_4PCL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PCL-query.scw
PDB file :
Tito_Scwrl_4PCL.pdb
: