Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFPRTLAILAAAAALVVACSHGGTPTGSSTTSGASPATPVAVPVPRSCAEPAGIPALLSPRDKLAQLLVVGVRDAA-DAQAVVTNYHVGGILIGSDTDLTIFD--GALAEIVAGGGPLPLAVSVDEEGGRVSRLRSLIGGTGPSARELAQTRTVQQVRDLARDRGRQMRKLGITIDFAPVVDVTDAPDDTVIGDRSFGSDPATVTAYAGAYAQGLRDAGVLPVLKHFPGHGRGSGDSHNGGVTTPPLDDLVGDDLVPYRTLVTQAPVGVMVGHLQVPGL-TGSEPASLSKAAVNLLRTGTGYGAPPFDGPVFSDDLSGMAAISDRFGVSEAVLRTLQAGADIALWVTTKEVPAVLDRLEQALRAGELPMSAVDRSVVRVATMKGPNPGCGR |
| 5IOB Chain:H ((14-346)) | ---------------------------------------PTAEDLAR-----AQIPE--QQRDQVASLVGVANYDQALDA----LNQGVGGIFIGSWTDENLLTEPGRNIEALREAVGRDFSVSIDFEGGRVQRATNILGDF-PSPR-VAQT-TPEQVEDLAEILGTGLAAHGVTVNFAPVVDV-DAWGL-------FSNDPAVAATYATAFAKGLSKVGITPVFKHFPGH-------------TPALDELKTYDLIPYGQALSETD-GAVVGHI-VPGLGTDGVPSSIDPATYQLLRSGDYPGGVPFDGVIYTDDLSG-------HSPAEAVLASLKAGADQALWIDYGSLGSAIDRVDAAVSSGEYPQEQL-ASALRVQLL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5IOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168272 for 2497 contacts (-67.4/contact) +
2D Compatibility (PS) -32078 + (NN) -17302 + (LL) 3244
1D Compatibility (HY) -18800 + (ID) 6800
Total energy: -240008.0 ( -96.12 by residue)
QMean score : 0.456
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