Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQIMYNYPAMLGHAGDMAGYAGTLQSLGAEIAVEQAALQSAWQGDTGITYQAWQAQWNQAMEDLVRAYHAMSSTHEANTMAMMARDTAEAAKWGG
3H6P Chain:D ((20-74))
-------------------GYAGTLQSLGADIASEQAVLSSAWQGDTGITYQGWQTQWNQALEDLVRAYQSMSG----------------------
General information:
TITO was launched using:
RESULT:
Template:
3H6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10931 for 273 contacts (-40.0/contact) +
2D Compatibility (PS) -6267 + (NN) -3263 + (LL) 3040
1D Compatibility (HY) -5600 + (ID) 2250
Total energy: -25271.0 ( -92.57 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_3H6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H6P-query.scw
PDB file :
Tito_Scwrl_3H6P.pdb
: