Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDQRWLIDKSALVRL-TDSPD--MEIWSNRIERGLVHITGVTRLEVGFSAECGE----I---ARREFREPPL-SAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVD-KDFDAIAALTGQKTERLTHRPPSA
2H1C Chain:A ((1-130))
----MILLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVAELRLGVALLLNGKKKNVLHERLEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGK--EIAAADGYIAATAKQHSLTVATRDTGSFFAAD-----------------
General information:
TITO was launched using:
RESULT:
Template:
2H1C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36140 for 808 contacts (-44.7/contact) +
2D Compatibility (PS) -12620 + (NN) -3237 + (LL) 1296
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -53801.0 ( -66.59 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_2H1C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H1C-query.scw
PDB file :
Tito_Scwrl_2H1C.pdb
: